The detailed information of tRNA gene sequence


Sequence ID>WENV170014318
Genome IDAYRE01000037
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 9296
End posion on genome 9381
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcatatatt
tRNA gene sequence 
GCCAAGGTCGCATAATCTGGTATTGCGCGGGACTGCTAATCTCGTTCCTTATGGAGCTGC
GGGTTCAAATCCCGTCTTTGGCGCTA
Downstream region at tRNA end position 
ctttatgaaa
Secondary structure (Cloverleaf model)
>WENV170014318	Ser	GCT
                   t      GCTA ctttatgaaa
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     T G C C C     A
      T A A        C      + | | | |     A
    C       T A C G       G C G G G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TTCCTTATGGAGCT
                    C - G
                    G - C
                    G + T
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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