The detailed information of tRNA gene sequence


Sequence ID>WENV170014325
Genome IDAYRE01000198
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 2377
End posion on genome 2302
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttattacaaa
tRNA gene sequence 
GACCCCGTCGTCTAGTGGCCAAGGACGTCAGGATTTCCTCCTGAATACGTATGTTCGAAT
CATACTGGGGTCGCCA
Downstream region at tRNA end position 
ttttcttttt
Secondary structure (Cloverleaf model)
>WENV170014325	Glu	TTC
                   a      GCCA ttttcttttt
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     C A T A C     A
      T G A        C      | | | | |     G
    G       T C T G       G T A T G     C
    G       + | | |                 T T
    C       G G A C
      C A A        G     ATAC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  A       T
                  T       C
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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