The detailed information of tRNA gene sequence


Sequence ID>WENV170014326
Genome IDAYRE01000483
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 1445
End posion on genome 1355
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacaatttgt
tRNA gene sequence 
GGAAGGATGGCTGAGTGGCTTAAGGCGCTCGCCTGGAAAGCGAGTATACGTTTATAGCGT
ATCTGGGGTTCAAATCCCCATCCTTCCACCA
Downstream region at tRNA end position 
ctattcaaaa
Secondary structure (Cloverleaf model)
>WENV170014326	Ser	GGA
                   t      ACCA ctattcaaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     A C C C C     A
      T G A        G      | | | | |     A
    G       G T C G       T G G G G     C
    G         + | |                 T T
    C       A G G C
      T T A        G     TATACGTTTATAGCGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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