The detailed information of tRNA gene sequence


Sequence ID>WENV170014331
Genome IDAYRE01000875
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 175
End posion on genome 99
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcataccagt
tRNA gene sequence 
CGGAGTGTAGCGCAGCCTGGTAGCGCACCTGGTTTGGGACCAGGGGGTCGAAGGTTCGAG
TCCTTTCACTCCGACCA
Downstream region at tRNA end position 
tttttaaatt
Secondary structure (Cloverleaf model)
>WENV170014331	Pro	TGG
                   t      ACCA tttttaaatt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     T T T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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