The detailed information of tRNA gene sequence


Sequence ID>WENV170014371
Genome IDAYRF01002488
Search identical group
Phylum/Class[AYRF] bioreactor metagenome; day 18 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 685
End posion on genome 596
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gatgcaggtc
tRNA gene sequence 
GGAGGAGTGGCAGAGTGGTTGAATGCACCGGTCTTGAAAACCGACGTAGGTGAAAGTCTA
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
ttttgcaatt
Secondary structure (Cloverleaf model)
>WENV170014371	Ser	TGA
                   c      GCCA ttttgcaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGTAGGTGAAAGTCTACC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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