The detailed information of tRNA gene sequence


Sequence ID>ENV08001955
Genome IDABOK01088254
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 31
End posion on genome 104
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaacaccctt
tRNA gene sequence 
GGCGGGGTGGCAGAGTGGTCATGCAGCGGACTGCAACTCCGTGTACGCCGGTTCGATTCC
GACCCCCGCCTCCA
Downstream region at tRNA end position 
agttttcaag
Secondary structure (Cloverleaf model)
>ENV08001955	Cys	GCA
                   t      TCCA agttttcaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T C        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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