The detailed information of tRNA gene sequence


Sequence ID>WENV170014382
Genome IDAYRF01010606
Search identical group
Phylum/Class[AYRF] bioreactor metagenome; day 18 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 296
End posion on genome 386
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcttcgttcc
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGCTGAATGCACTGGTCTTGAAAACCAGCGAGGGTTAATAGCTC
TCCGAGAGTTCAAATCTCTCCTCCTCCGCCA
Downstream region at tRNA end position 
tacataaaaa
Secondary structure (Cloverleaf model)
>WENV170014382	Ser	TGA
                   c      GCCA tacataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     A
    G       G A C G       G A G A G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CGAGGGTTAATAGCTCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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