The detailed information of tRNA gene sequence


Sequence ID>WENV170014389
Genome IDAYRF01018501
Search identical group
Phylum/Class[AYRF] bioreactor metagenome; day 18 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 316
End posion on genome 230
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnnnngt
tRNA gene sequence 
GCCCAGATGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGCTAGTGCCCGCAAGGGCGTG
GAGGTTCGAGTCCTCTTCTGGGCACCA
Downstream region at tRNA end position 
tcattttttc
Secondary structure (Cloverleaf model)
>WENV170014389	Leu	CAG
                   t      ACCA tcattttttc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCCGCAAGGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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