The detailed information of tRNA gene sequence


Sequence ID>WENV170014396
Genome IDAYRF01021580
Search identical group
Phylum/Class[AYRF] bioreactor metagenome; day 18 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 181
End posion on genome 257
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
catctgaggt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
ataaaacaag
Secondary structure (Cloverleaf model)
>WENV170014396	Pro	CGG
                   t      ACCA ataaaacaag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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