The detailed information of tRNA gene sequence


Sequence ID>WENV170014445
Genome IDAYRG01000141
Search identical group
Phylum/Class[AYRG] bioreactor metagenome; day 33 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 176
End posion on genome 86
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagcgcgttT
tRNA gene sequence 
GGAGAAGTACCCAAGCGGCTGAAGGGGCTCGCCTGGAAAGTGAGTAGGTCGTTAATAGCG
GCGCGAGGGTTCAAATCCCTCCTTCTCCGTta
Downstream region at tRNA end position 
gtttttaaga
Secondary structure (Cloverleaf model)
>WENV170014445	Ser	GGA
                   T      GTta gtttttaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTCGTTAATAGCGGCGC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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