The detailed information of tRNA gene sequence


Sequence ID>WENV170014448
Genome IDAYRG01000185
Search identical group
Phylum/Class[AYRG] bioreactor metagenome; day 33 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 11812
End posion on genome 11725
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcatttac
tRNA gene sequence 
GGACAGCTGGCTGAGTGGCCGAAAGCGCGCGCTTGGAAGGCGTGTATAGGGCAACCTATC
TAGGGTTCAAATCCCTAGCTGTCCGCCA
Downstream region at tRNA end position 
tttattcttt
Secondary structure (Cloverleaf model)
>WENV170014448	Ser	GGA
                   c      GCCA tttattcttt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       T A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TATAGGGCAACCTATC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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