The detailed information of tRNA gene sequence


Sequence ID>ENV08001956
Genome IDABOK01088743
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 113
End posion on genome 24
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAAGCTTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCGAGGGTGCGAGCCCT
CCGTGAGTTCGAATCTCACAGCTTCCGCCA
Downstream region at tRNA end position 
aaaacatcaa
Secondary structure (Cloverleaf model)
>ENV08001956	Ser	TGA
                   c      GCCA aaaacatcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAGGGTGCGAGCCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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