The detailed information of tRNA gene sequence


Sequence ID>WENV170014481
Genome IDAYRG01002036
Search identical group
Phylum/Class[AYRG] bioreactor metagenome; day 33 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 921
End posion on genome 832
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgaattgc
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTGAAGGAGCTCGCCTGGAAAGCGTGTATAGGAGAAATCTTA
TCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
tacagcctac
Secondary structure (Cloverleaf model)
>WENV170014481	Ser	GGA
                   c      GCCA tacagcctac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATAGGAGAAATCTTATC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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