The detailed information of tRNA gene sequence


Sequence ID>WENV170014547
Genome IDAYRH01004706
Search identical group
Phylum/Class[AYRH] bioreactor metagenome; day 46 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 223
End posion on genome 308
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caatataaac
tRNA gene sequence 
AGAGGGGTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTAAACAGCAATGTTTC
GAGAGTTCGAATCTCTTCCCCTCTGCtt
Downstream region at tRNA end position 
ttttctgtat
Secondary structure (Cloverleaf model)
>WENV170014547	Ser	GGA
                   c      GCtt ttttctgtat
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TAAACAGCAATGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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