The detailed information of tRNA gene sequence


Sequence ID>ENV08001959
Genome IDABOK01092151
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 9
End posion on genome 84
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nngaggtttg
tRNA gene sequence 
GGCCCTATAGCTCAGTCGGTTAGAGCGCCGCCCTGATAAGGTCGGAGGTCACTGGTTCAA
GTCCAGTTAGGCCCACag
Downstream region at tRNA end position 
tgcgaaccct
Secondary structure (Cloverleaf model)
>ENV08001959	Ile	GAT
                   g      ACag tgcgaaccct
                     G - C
                     G - C
                     C   C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     GAGGTC
                    C - G
                    C   C
                    G + T
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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