The detailed information of tRNA gene sequence


Sequence ID>WENV170014787
Genome IDAZIB01000666
Search identical group
Phylum/Class[AZIB] marine sediment metagenome; sample MGS-HAV from oil contaminated site at the Gulf of Genoa where a Haven tanker sank in
Species
Start position on genome 543
End posion on genome 468
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tattatccct
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCATCGGTTCGATC
CCGTTATTCTCCACCA
Downstream region at tRNA end position 
tttcttaaaa
Secondary structure (Cloverleaf model)
>WENV170014787	Ala	TGC
                   t      ACCA tttcttaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          C T
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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