The detailed information of tRNA gene sequence


Sequence ID>WENV170014802
Genome IDAZIB01001391
Search identical group
Phylum/Class[AZIB] marine sediment metagenome; sample MGS-HAV from oil contaminated site at the Gulf of Genoa where a Haven tanker sank in
Species
Start position on genome 428
End posion on genome 337
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgccttct
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCTTTAAATCC
CATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tctattgaat
Secondary structure (Cloverleaf model)
>WENV170014802	Ser	GCT
                   t      GCCA tctattgaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGCTTTAAATCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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