The detailed information of tRNA gene sequence


Sequence ID>WENV170014804
Genome IDAZIB01001415
Search identical group
Phylum/Class[AZIB] marine sediment metagenome; sample MGS-HAV from oil contaminated site at the Gulf of Genoa where a Haven tanker sank in
Species
Start position on genome 3080
End posion on genome 3169
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccttccttat
tRNA gene sequence 
GGAGGGGTGGCTGAGCGGTTGAAAGCACTGGTCTTGAAAACCAGCGTGGGTTAGCGCCCA
CCCAGGGTTCGAATCCCTGCCCCTCCGCCA
Downstream region at tRNA end position 
ttctttaagn
Secondary structure (Cloverleaf model)
>WENV170014804	Ser	TGA
                   t      GCCA ttctttaagn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CGTGGGTTAGCGCCCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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