The detailed information of tRNA gene sequence


Sequence ID>WENV170014838
Genome IDAZIC01000163
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 259
End posion on genome 173
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taatcagcgt
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAGGGCGCAAGCCTGGAAAGCTTGTGGGGCATCCGCCCCTCG
GGAGTTCGAATCCCCCCTTCGGCGCCA
Downstream region at tRNA end position 
ttcttctttt
Secondary structure (Cloverleaf model)
>WENV170014838	Ser	GGA
                   t      GCCA ttcttctttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
        G A        A      | | |   |     G
      T     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGGGCATCCGCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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