The detailed information of tRNA gene sequence


Sequence ID>WENV170014841
Genome IDAZIC01000299
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1956
End posion on genome 2032
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcgcaaagat
tRNA gene sequence 
GGGCTCGTGGTCTAGATGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAC
TCTCAGCGGGCCCACCA
Downstream region at tRNA end position 
cagttctctt
Secondary structure (Cloverleaf model)
>WENV170014841	Val	GAC
                   t      ACCA cagttctctt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T C
                    T     G A C T C     A
      A G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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