The detailed information of tRNA gene sequence


Sequence ID>WENV170014850
Genome IDAZIC01000951
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 117
End posion on genome 207
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaagttat
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACCTCAAAAGGGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
aagagtgtat
Secondary structure (Cloverleaf model)
>WENV170014850	Ser	GGA
                   t      GCAA aagagtgtat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCTCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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