The detailed information of tRNA gene sequence


Sequence ID>WENV170014853
Genome IDAZIC01001011
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 114
End posion on genome 190
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcttggtat
tRNA gene sequence 
GGCTATATAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCCCTAGTTCGAA
TCTAGGTATAGCCACCA
Downstream region at tRNA end position 
tattcacttc
Secondary structure (Cloverleaf model)
>WENV170014853	Met	CAT
                   t      ACCA tattcacttc
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     A - T          T A
                    T     G G A T C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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