The detailed information of tRNA gene sequence


Sequence ID>WENV170014862
Genome IDAZIC01001367
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1602
End posion on genome 1515
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacgaattgt
tRNA gene sequence 
GACGAGATAGCCAAGCCCGGTATGGCGCAGGATTGCTAATCCTGTGGTGCTTTGCGCCTC
GGGGGTTCGAATCCCCCTCTCGTCGCTA
Downstream region at tRNA end position 
aatctttttt
Secondary structure (Cloverleaf model)
>WENV170014862	Ser	GCT
                   t      GCTA aatctttttt
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    C       | | | |                 T T
    G       T G G C
      G T A        G     TGGTGCTTTGCGCCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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