The detailed information of tRNA gene sequence


Sequence ID>WENV170014869
Genome IDAZIC01001583
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 90
End posion on genome 179
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcttaaacgt
tRNA gene sequence 
GGAGAGCTGGCCGAGCGGCCGAAGGCGCACGCCTGGAAAGTGTGTATAGGTTAATCCCTA
TCGAGGGTTCGAATCCCTCGCTCTCCGCCA
Downstream region at tRNA end position 
cttaatttta
Secondary structure (Cloverleaf model)
>WENV170014869	Ser	GGA
                   t      GCCA cttaatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATAGGTTAATCCCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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