The detailed information of tRNA gene sequence


Sequence ID>WENV170014870
Genome IDAZIC01001589
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1154
End posion on genome 1230
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaagaataa
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCTCGACTCATAATCGATCGGTCGAAGGTTCGAG
TCCTTCCAGGCCCACCA
Downstream region at tRNA end position 
ttttctaact
Secondary structure (Cloverleaf model)
>WENV170014870	Met	CAT
                   a      ACCA ttttctaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     CGGTC
                    C   T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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