The detailed information of tRNA gene sequence


Sequence ID>WENV170014876
Genome IDAZIC01001825
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 215
End posion on genome 141
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
attatcccat
tRNA gene sequence 
GGGCCTGTAGTGTAGTGGATATCACTTTAGCCTCCGGAGCTTAGAACCCGGGTTCGATTC
CCGGCAGGCCCGCTA
Downstream region at tRNA end position 
ttattttttg
Secondary structure (Cloverleaf model)
>WENV170014876	Arg	CCG
                   t      GCTA ttattttttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | |                 T T
    A       T C A C
      T A          T     GAAC
                    T - A
                    T   T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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