The detailed information of tRNA gene sequence


Sequence ID>WENV170014877
Genome IDAZIC01001830
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 986
End posion on genome 1075
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgctgaatca
tRNA gene sequence 
GGAGAGATGACAGAGCGGTTGAATGTACCGGTCTTGAAAACCGGCGTAGGTTTATCCCTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
tacatcaaaa
Secondary structure (Cloverleaf model)
>WENV170014877	Ser	TGA
                   a      GCCA tacatcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C A       C A G G G     C
    G         | | |                 T T
    T       A T G T
      T G A        A     CGTAGGTTTATCCCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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