The detailed information of tRNA gene sequence


Sequence ID>WENV170014879
Genome IDAZIC01002041
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 214
End posion on genome 125
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgggtcagc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCCCGGAAGGGTC
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
ttgacttggc
Secondary structure (Cloverleaf model)
>WENV170014879	Ser	GCT
                   c      GCCA ttgacttggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCCCGGAAGGGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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