The detailed information of tRNA gene sequence


Sequence ID>WENV170014887
Genome IDAZIC01002603
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1380
End posion on genome 1303
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
tcttctgaat
tRNA gene sequence
GGGATAGTAGGGTAGCTTGGTCCATCCTCGAGCGTTTGGGACGCTTGGACTGCGGTTCAA
ATCCGCGCTATCCCACCA
Downstream region at tRNA end position
gactttttta
Secondary structure (Cloverleaf model)
>WENV170014887	Pro	TGG
                   t      ACCA gactttttta
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C          T A
                    T     G C G C C     A
    T C G A        A      + | | | |     A
  T         T G G G       T G C G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     GGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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