The detailed information of tRNA gene sequence


Sequence ID>WENV170014890
Genome IDAZIC01002941
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1859
End posion on genome 1931
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
tagtcctaag
tRNA gene sequence
GGGCTTGTAGATCAGTTGGGAGATCGTCGCCTTTGCAAGGCGAAGGCCCTGGGTTCGAAT
CCCAGCAAGTCCAtac
Downstream region at tRNA end position
tagtgcacca
Secondary structure (Cloverleaf model)
>WENV170014890	Ala	TGC
                   g      Atac tagtgcacca
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T A G       C T G G G     C
    G       | | | |                 T T
    G       G A T C
      G A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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