The detailed information of tRNA gene sequence


Sequence ID>WENV170014898
Genome IDAZIC01003666
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 7246
End posion on genome 7335
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcaagaccc
tRNA gene sequence 
GGAGAAATGGCCGAGTGGCTGAAGGCGCACCCCTGCTAAGGGTGTATATGGGAAACCGTA
TCGAGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
tacataaaaa
Secondary structure (Cloverleaf model)
>WENV170014898	Ser	GCT
                   c      GCCA tacataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATATGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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