The detailed information of tRNA gene sequence


Sequence ID>WENV170014902
Genome IDAZIC01004130
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 475
End posion on genome 551
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcttggtat
tRNA gene sequence 
GGCTATGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCGGTGGTTCGAA
TCCACCCATAGCCACCA
Downstream region at tRNA end position 
cctatacgat
Secondary structure (Cloverleaf model)
>WENV170014902	Met	CAT
                   t      ACCA cctatacgat
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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