The detailed information of tRNA gene sequence


Sequence ID>WENV170014905
Genome IDAZIC01004266
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 5143
End posion on genome 5054
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcgcgtctt
tRNA gene sequence 
GGAGAGTTGACAGAGCGGCCGAATGTACTGGTCTTGAAAACCAGCGTAGGTTTATCCCTA
CCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
tatttaagcc
Secondary structure (Cloverleaf model)
>WENV170014905	Ser	TGA
                   t      GCCA tatttaagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C A       C A G G G     C
    G         | | |                 T T
    C       A T G T
      C G A        A     CGTAGGTTTATCCCTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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