The detailed information of tRNA gene sequence


Sequence ID>WENV170014909
Genome IDAZIC01004417
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1570
End posion on genome 1651
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
aaatccatcc
tRNA gene sequence 
GGGGATGTGGTGGAATTGGCAGACACGCTAGATTTAGGATCTAGTGCCGCAAGGCGTGCA
GGTTCAAGTCCTGTCATCCCCAttt
Downstream region at tRNA end position 
gaaaagcact
Secondary structure (Cloverleaf model)
>WENV170014909	Leu	TAG
                   c      Attt gaaaagcact
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G T G       G C A G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCCGCAAGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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