The detailed information of tRNA gene sequence


Sequence ID>WENV170014912
Genome IDAZIC01004520
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 3189
End posion on genome 3263
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ccacctgtaa
tRNA gene sequence
GGGGCCGTAGCTCAATTGGTTAGAGTACCGGACTGTCGATCCGGGGGTTGCGGGTTCAAG
TCCCGTCGGCCTCGCtt
Downstream region at tRNA end position
actacgctcg
Secondary structure (Cloverleaf model)
>WENV170014912	Asp	GTC
                   a      GCtt actacgctcg
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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