The detailed information of tRNA gene sequence


Sequence ID>WENV170014917
Genome IDAZIC01004568
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 76667
End posion on genome 76595
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcattctttt
tRNA gene sequence 
GTACGTATAGCTAAGACGGTAAAGCGGTTGGTTGCAGACCAACAATGCCTCGGTTCGAGT
CCGAGTACGTACTtct
Downstream region at tRNA end position 
acggtagctc
Secondary structure (Cloverleaf model)
>WENV170014917	Cys	GCA
                   t      Ttct acggtagctc
                     G - C
                     T - A
                     A - T
                     C - G
                     G - C
                     T - A
                     A - T          T G
                    T     G A G C C     A
      A G A        A      | | | | |     G
    C       A T C G       C T C G G     C
    G         | | |                 T T
    G       A A G C
      T A          G     AATGC
                    G - C
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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