The detailed information of tRNA gene sequence


Sequence ID>WENV170014928
Genome IDAZIC01004568
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 66471
End posion on genome 66385
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agatcacttT
tRNA gene sequence 
GCTCGCATGGCACAGCGGCTAATGCGCCAGTCTTGAAAACTGGAGCTCCAATCGGGGCAC
GTCGGTTCGAGTCCGGCTGCGGGCGTta
Downstream region at tRNA end position 
ggatgtgttg
Secondary structure (Cloverleaf model)
>WENV170014928	Ser	TGA
                   T      GTta ggatgtgttg
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     C G G C C     A
      C G A        G      | + | | |     G
    G       C A C G       G T C G G     C
    G         | | |                 T T
    C       A T G C
      T A          G     AGCTCCAATCGGGGCAC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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