The detailed information of tRNA gene sequence


Sequence ID>WENV170014934
Genome IDAZIC01004568
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 61394
End posion on genome 61309
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatttatttT
tRNA gene sequence 
GCTAGTATAGTCAAGTGGTATGACGACGGCCTGCTATGCCGTTAGATTTAAATATCTGCA
TCGGTTCGAATCCGGTTACTAGCGTaa
Downstream region at tRNA end position 
ttaacatgga
Secondary structure (Cloverleaf model)
>WENV170014934	Ser	GCT
                   T      GTaa ttaacatgga
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     T G G C C     A
        G A        A      | + | | |     G
      T     A C T G       A T C G G     C
      G     | | | |                 T T
      G     T G A C
        T A        G     TAGATTTAAATATCTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       T
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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