The detailed information of tRNA gene sequence


Sequence ID>WENV170014935
Genome IDAZIC01004568
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 53881
End posion on genome 53796
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
attcatttat
tRNA gene sequence 
GTCGGTGTTGCCCAGCTAGGTCAAAGGCGACGGACTTAAGATCCGTTCTCGTAGGAGTCC
GAGAGTTCGAATCTCTCCGCCGACACtt
Downstream region at tRNA end position 
taattaataa
Secondary structure (Cloverleaf model)
>WENV170014935	Leu	TAA
                   t      ACtt taattaataa
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C T C T C     A
    T C G A        T      | | | | |     G
  A         C C C G       G A G A G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGTAGGAGTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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