The detailed information of tRNA gene sequence


Sequence ID>WENV170014938
Genome IDAZIC01004645
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 856
End posion on genome 780
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atactaccgt
tRNA gene sequence 
CGGGGCATGGCGCAGTCTGGTAGCGCACTTGTCTGGGGGACAAGGGGTCGCAAGTTCGAA
TCTTGCTGTTCCGACCA
Downstream region at tRNA end position 
tatacaccaa
Secondary structure (Cloverleaf model)
>WENV170014938	Pro	GGG
                   t      ACCA tatacaccaa
                     C - G
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     A - T          T A
                    T     C G T T C     A
      T G A        G      | | | | |     G
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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