The detailed information of tRNA gene sequence


Sequence ID>WENV170014939
Genome IDAZIC01004783
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 2953
End posion on genome 2869
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgggctgca
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGATTGCACCGGTCTTGAAAACCGGCGTGCCGAGAGGTACC
GGGGGTTCGAATCCCCCCCTCTCCGttt
Downstream region at tRNA end position 
ttgaaaaaag
Secondary structure (Cloverleaf model)
>WENV170014939	Ser	TGA
                   a      Gttt ttgaaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      C G A        A     CGTGCCGAGAGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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