The detailed information of tRNA gene sequence


Sequence ID>WENV170014947
Genome IDAZIC01004988
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 1508
End posion on genome 1436
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agactggtag
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGCAGAGCACTGGATTCCAAATCCAGCGGTTGGGGGTTCAATT
CCCTCCGCCCGTGttt
Downstream region at tRNA end position 
tgatgttgca
Secondary structure (Cloverleaf model)
>WENV170014947	Trp	CCA
                   g      Gttt tgatgttgca
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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