The detailed information of tRNA gene sequence


Sequence ID>WENV170014948
Genome IDAZIC01005002
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 12409
End posion on genome 12484
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaacaactT
tRNA gene sequence 
GGGGCCGTAGCTCAATCGGTTAGAGCAGCAAACTCATAATTTGTTGGTTACAGGTTCGAG
TCCTGTCGGCCCTATtt
Downstream region at tRNA end position 
ttcttttctt
Secondary structure (Cloverleaf model)
>WENV170014948	Met	CAT
                   T      ATtt ttcttttctt
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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