The detailed information of tRNA gene sequence


Sequence ID>WENV170014953
Genome IDAZIC01005183
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 12351
End posion on genome 12424
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caccaaccag
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGGAGAGCGTTTGGCTGGCAGCCAAAAGGTCACCGGTTCGAGC
CCGGTATCCTCCACtc
Downstream region at tRNA end position 
aaagccactt
Secondary structure (Cloverleaf model)
>WENV170014953	Ala	GGC
                   g      ACtc aaagccactt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C G
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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