The detailed information of tRNA gene sequence


Sequence ID>WENV170014955
Genome IDAZIC01005948
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 252
End posion on genome 179
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtcctaataa
tRNA gene sequence 
GGCGTCTTGGCCGAGTGGCTAGGCAGAGGTCTGCAAAACCTTCTACAGCGGTTCGAATCC
GCTAGACGCCTCAA
Downstream region at tRNA end position 
taaaaagaga
Secondary structure (Cloverleaf model)
>WENV170014955	Cys	GCA
                   a      TCAA taaaaagaga
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     CTAC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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