The detailed information of tRNA gene sequence


Sequence ID>WENV170014974
Genome IDAZIC01011623
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 190
End posion on genome 116
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttttattttt
tRNA gene sequence 
GCCACCTTAGCTCAGTTTGGTAGAGCGGCGGTATCGTAAACCGTAGGTCGTCGGTTCGAC
CCCGACAGGTGGCTCtt
Downstream region at tRNA end position 
gaatttgtaa
Secondary structure (Cloverleaf model)
>WENV170014974	Thr	CGT
                   t      TCtt gaatttgtaa
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          C C
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  A       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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