The detailed information of tRNA gene sequence


Sequence ID>WENV170014982
Genome IDAZIC01012099
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 599
End posion on genome 673
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aacaaattat
tRNA gene sequence 
GCCGATGTAGCTCAGCTGGCTAGAGCAGCTGATTTGTAATCAGCAGGTCGTGGGTTCGAG
TCCCTCTATCGGCTCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170014982	Thr	TGT
                   t      TCnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G + T          T G
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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