The detailed information of tRNA gene sequence


Sequence ID>WENV170014996
Genome IDAZIC01015637
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 89
End posion on genome 175
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaagtgatt
tRNA gene sequence 
GGAAGGTAGCCGGATACGGTTTGCCGGACCGCACTGCTAATGCGTGTGCCTGCCAGGGTG
TGTGGGTTCGAATCCCATGCCTTCCGCtt
Downstream region at tRNA end position 
tatattcaga
Secondary structure (Cloverleaf model)
>WENV170014996	Ser	GCT
                   t      GCtt tatattcaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T + G          T A
                    A     T A C C C     A
    C A T A        G      + | | | |     G
  G         G G C C       G T G G G     C
  G         | | | |                 T T
  T         C C G G
    T T G          A     GTGCCTGCCAGGGTGT
                    C   T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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