The detailed information of tRNA gene sequence


Sequence ID>WENV170014998
Genome IDAZIC01016133
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 151
End posion on genome 226
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgggaattt
tRNA gene sequence 
AGGCCAGTGGCTCAATTGGTAGAGCATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctatttaaac
Secondary structure (Cloverleaf model)
>WENV170014998	Trp	CCA
                   t      GCCA ctatttaaac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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