The detailed information of tRNA gene sequence


Sequence ID>WENV170015008
Genome IDAZIC01016774
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 642
End posion on genome 570
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtttacaaaa
tRNA gene sequence 
GCCCGGTTAGTTTAATGGTTAAAATAGCAATCTCATACGTTGTTTATATAAGTTCAAGTC
TTATACCAGGCTCac
Downstream region at tRNA end position 
catatatgct
Secondary structure (Cloverleaf model)
>WENV170015008	Met	CAT
                   a      TCac catatatgct
                     G - C
                     C - G
                     C - G
                     C   A
                     G - C
                     G - C
                     T - A          T G
                    T     T A T T C     A
      T A A        A      | | | | |     A
    G       T T T G       A T A A G     C
    G       | | | +                 T T
    T       A A A T
      T A          A     TTAT
                    G + T
                    C - G
                    A - T
                    A - T
                    T + G
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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